WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D4.14b.1 Sequence Name  C34D4.14b.1
Length (nt)  8450   Chromosome Location  IV: 7134349-7144713
Chromosome . Primary Identifier  IV Chromosome Location . Start  7134349
Chromosome Location . End  7144713 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D4.14b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016405 hecd-1 C34D4.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D4.14b C34D4.14b 7836   IV: 7134857-7134964

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C34D4.14b.1 7134349 7144713 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129144   616   IV: 7134349-7134964 Caenorhabditis elegans
Exon129148   74   IV: 7135020-7135093 Caenorhabditis elegans
Exon129158   268   IV: 7135140-7135407 Caenorhabditis elegans
Exon129168   145   IV: 7135462-7135606 Caenorhabditis elegans
Exon129178   423   IV: 7135653-7136075 Caenorhabditis elegans
Exon129188   431   IV: 7136133-7136563 Caenorhabditis elegans
Exon129198   944   IV: 7136613-7137556 Caenorhabditis elegans
Exon129208   864   IV: 7137639-7138502 Caenorhabditis elegans
Exon129218   112   IV: 7138909-7139020 Caenorhabditis elegans
Exon129228   168   IV: 7139088-7139255 Caenorhabditis elegans
Exon129238   1443   IV: 7139311-7140753 Caenorhabditis elegans
Exon129248   261   IV: 7140801-7141061 Caenorhabditis elegans
Exon129258   114   IV: 7141112-7141225 Caenorhabditis elegans
Exon129268   138   IV: 7141341-7141478 Caenorhabditis elegans
Exon129278   384   IV: 7141656-7142039 Caenorhabditis elegans
Exon129288   659   IV: 7142118-7142776 Caenorhabditis elegans
Exon129296   130   IV: 7142822-7142951 Caenorhabditis elegans
Exon129312   75   IV: 7143235-7143309 Caenorhabditis elegans
Exon129318   492   IV: 7143355-7143846 Caenorhabditis elegans
Exon129328   245   IV: 7143916-7144160 Caenorhabditis elegans
Exon129337   362   IV: 7144207-7144568 Caenorhabditis elegans
Exon129347   102   IV: 7144612-7144713 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C34D4.14b.1 7134349 7144713 -1

1 Sequence

Length
8450

1 Sequence Ontology Term

Identifier Name Description
transcript