WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F33D4.2f Sequence Name  F33D4.2f
Length (nt)  8541   Chromosome Location  IV: 7681425-7681468
Chromosome . Primary Identifier  IV Chromosome Location . Start  7681425
Chromosome Location . End  7681468
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D4.2f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28018 ITR-1, isoform f 325.9 2846 Caenorhabditis elegans
 

Other

50 RNAi

WormBase ID
WBRNAi00095605
WBRNAi00061091
WBRNAi00089828
WBRNAi00066969
WBRNAi00066993
WBRNAi00066997
WBRNAi00067003
WBRNAi00067070
WBRNAi00067099
WBRNAi00067287
WBRNAi00067350
WBRNAi00067499
WBRNAi00067723
WBRNAi00067761
WBRNAi00000810
WBRNAi00046203
WBRNAi00078895
WBRNAi00085492
WBRNAi00008743
WBRNAi00025376
WBRNAi00061437
WBRNAi00071711
WBRNAi00078896
WBRNAi00078897
WBRNAi00108178
WBRNAi00071422
WBRNAi00063877
WBRNAi00110595
WBRNAi00064376
WBRNAi00022978

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F33D4.2f 7681425 7681468 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002173 itr-1 F33D4.2 Caenorhabditis elegans

32 Locations


Feature . Primary Identifier
Start End Strand
CDS:F33D4.2f 7681425 7681468 1
CDS:F33D4.2f 7681709 7681852 1
CDS:F33D4.2f 7681906 7682113 1
CDS:F33D4.2f 7682273 7682422 1
CDS:F33D4.2f 7682825 7683112 1
CDS:F33D4.2f 7683159 7683317 1
CDS:F33D4.2f 7685672 7685829 1
CDS:F33D4.2f 7686062 7686114 1
CDS:F33D4.2f 7686160 7686281 1
CDS:F33D4.2f 7686329 7686529 1
CDS:F33D4.2f 7686699 7687145 1
CDS:F33D4.2f 7687190 7687329 1
CDS:F33D4.2f 7687534 7687767 1
CDS:F33D4.2f 7687817 7687936 1
CDS:F33D4.2f 7687983 7688298 1
CDS:F33D4.2f 7688347 7689141 1
CDS:F33D4.2f 7689192 7690542 1
CDS:F33D4.2f 7690615 7690736 1
CDS:F33D4.2f 7691379 7691480 1
CDS:F33D4.2f 7691552 7691815 1
CDS:F33D4.2f 7692131 7692245 1
CDS:F33D4.2f 7692298 7692473 1
CDS:F33D4.2f 7692521 7692662 1
CDS:F33D4.2f 7692937 7692963 1
CDS:F33D4.2f 7693381 7693549 1
CDS:F33D4.2f 7693593 7694239 1
CDS:F33D4.2f 7694285 7694556 1
CDS:F33D4.2f 7694922 7695237 1
CDS:F33D4.2f 7695289 7695476 1
CDS:F33D4.2f 7695524 7695836 1

1 Sequence

Length
8541

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F33D4.2f.1 F33D4.2f.1 8827   IV: 7681359-7696923