WormMine: MRNA Transcript:F08B4.2a.1

• WormMine ID: Transcript:F08B4.2a.1
• Sequence Name: F08B4.2a.1
• Length (nt): 4920
• Chromosome Location: IV: 8668935-8676611
• Chromosome . Primary Identifier: IV
• Chromosome Location . Start: 8668935
• Chromosome Location . End: 8676611
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: F08B4.2a.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00000397	cdh-5	F08B4.2	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:F08B4.2a	F08B4.2a	4350	IV: 8669142-8669216

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: Transcript:F08B4.2a.1
• Start: 8668935
• End: 8676611
• Strand: 1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

22 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon134277			282	IV: 8668935-8669216	Caenorhabditis elegans
Exon134281			147	IV: 8669334-8669480	Caenorhabditis elegans
Exon134285			219	IV: 8669564-8669782	Caenorhabditis elegans
Exon134289			271	IV: 8669835-8670105	Caenorhabditis elegans
Exon134293			157	IV: 8670223-8670379	Caenorhabditis elegans
Exon134297			303	IV: 8670438-8670740	Caenorhabditis elegans
Exon134301			184	IV: 8670786-8670969	Caenorhabditis elegans
Exon134305			222	IV: 8671042-8671263	Caenorhabditis elegans
Exon134309			429	IV: 8671575-8672003	Caenorhabditis elegans
Exon134311			190	IV: 8672298-8672487	Caenorhabditis elegans
Exon134315			137	IV: 8672540-8672676	Caenorhabditis elegans
Exon134319			180	IV: 8672722-8672901	Caenorhabditis elegans
Exon134323			132	IV: 8672973-8673104	Caenorhabditis elegans
Exon134327			161	IV: 8673153-8673313	Caenorhabditis elegans
Exon134331			198	IV: 8673603-8673800	Caenorhabditis elegans
Exon134335			184	IV: 8673851-8674034	Caenorhabditis elegans
Exon134339			165	IV: 8674084-8674248	Caenorhabditis elegans
Exon134343			231	IV: 8674332-8674562	Caenorhabditis elegans
Exon134347			153	IV: 8674654-8674806	Caenorhabditis elegans
Exon134351			476	IV: 8675044-8675519	Caenorhabditis elegans
Exon134355			57	IV: 8675575-8675631	Caenorhabditis elegans
Exon134362			442	IV: 8676170-8676611	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:F08B4.2a.1
• Start: 8668935
• End: 8676611
• Strand: 1

1 Sequence

• Length: 4920

1 Sequence Ontology Term

• Name: transcript