WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F56H11.1e.1 Sequence Name  F56H11.1e.1
Length (nt)  1935   Chromosome Location  IV: 9540852-9546095
Chromosome . Primary Identifier  IV Chromosome Location . Start  9540852
Chromosome Location . End  9546095 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H11.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001403 fbl-1 F56H11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H11.1e F56H11.1e 1935   IV: 9540852-9540891

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56H11.1e.1 9540852 9546095 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137805   40   IV: 9540852-9540891 Caenorhabditis elegans
Exon137811   236   IV: 9541045-9541280 Caenorhabditis elegans
Exon137819   154   IV: 9541328-9541481 Caenorhabditis elegans
Exon137827   153   IV: 9541601-9541753 Caenorhabditis elegans
Exon137832   258   IV: 9542035-9542292 Caenorhabditis elegans
Exon137843   76   IV: 9542968-9543043 Caenorhabditis elegans
Exon137851   110   IV: 9543087-9543196 Caenorhabditis elegans
Exon137859   141   IV: 9543295-9543435 Caenorhabditis elegans
Exon137876   258   IV: 9543873-9544130 Caenorhabditis elegans
Exon137883   127   IV: 9544219-9544345 Caenorhabditis elegans
Exon137898   239   IV: 9545334-9545572 Caenorhabditis elegans
Exon137901   143   IV: 9545953-9546095 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56H11.1e.1 9540852 9546095 1

1 Sequence

Length
1935

1 Sequence Ontology Term

Identifier Name Description
transcript