WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14G10.2a.1 Sequence Name  T14G10.2a.1
Length (nt)  4745   Chromosome Location  IV: 10164288-10174341
Chromosome . Primary Identifier  IV Chromosome Location . Start  10164288
Chromosome Location . End  10174341 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14G10.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004254 pxf-1 T14G10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14G10.2a T14G10.2a 4413   IV: 10164609-10164646

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2a.1 10164288 10174341 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140118   359   IV: 10164288-10164646 Caenorhabditis elegans
Exon140128   314   IV: 10164696-10165009 Caenorhabditis elegans
Exon140135   139   IV: 10165395-10165533 Caenorhabditis elegans
Exon140151   156   IV: 10165965-10166120 Caenorhabditis elegans
Exon140161   237   IV: 10166468-10166704 Caenorhabditis elegans
Exon140171   229   IV: 10167020-10167248 Caenorhabditis elegans
Exon140181   277   IV: 10167299-10167575 Caenorhabditis elegans
Exon140191   240   IV: 10167623-10167862 Caenorhabditis elegans
Exon140201   201   IV: 10167908-10168108 Caenorhabditis elegans
Exon140211   739   IV: 10168165-10168903 Caenorhabditis elegans
Exon140223   1357   IV: 10168952-10170308 Caenorhabditis elegans
Exon140231   108   IV: 10170740-10170847 Caenorhabditis elegans
Exon140241   76   IV: 10171669-10171744 Caenorhabditis elegans
Exon140247   84   IV: 10173261-10173344 Caenorhabditis elegans
Exon140253   128   IV: 10174033-10174160 Caenorhabditis elegans
Exon140263   101   IV: 10174241-10174341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2a.1 10164288 10174341 -1

1 Sequence

Length
4745

1 Sequence Ontology Term

Identifier Name Description
transcript