WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y43C5A.6a Sequence Name  Y43C5A.6a
Length (nt)  1188   Chromosome Location  IV: 10281976-10282102
Chromosome . Primary Identifier  IV Chromosome Location . Start  10281976
Chromosome Location . End  10282102
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43C5A.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29064 RAD-51, isoform a 43.6 395 Caenorhabditis elegans
 

Other

55 RNAi

WormBase ID
WBRNAi00077191
WBRNAi00009328
WBRNAi00093828
WBRNAi00093827
WBRNAi00093830
WBRNAi00093829
WBRNAi00067637
WBRNAi00068096
WBRNAi00056465
WBRNAi00082135
WBRNAi00098036
WBRNAi00077680
WBRNAi00064204
WBRNAi00065424
WBRNAi00098236
WBRNAi00097180
WBRNAi00077681
WBRNAi00097368
WBRNAi00082132
WBRNAi00083898
WBRNAi00083901
WBRNAi00084465
WBRNAi00084466
WBRNAi00062854
WBRNAi00093826
WBRNAi00076008
WBRNAi00028228
WBRNAi00062957
WBRNAi00062959
WBRNAi00082131

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y43C5A.6a 10281976 10282102 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004297 rad-51 Y43C5A.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y43C5A.6a 10281976 10282102 -1
CDS:Y43C5A.6a 10282234 10282510 -1
CDS:Y43C5A.6a 10282560 10282651 -1
CDS:Y43C5A.6a 10283138 10283295 -1
CDS:Y43C5A.6a 10283350 10283496 -1
CDS:Y43C5A.6a 10283733 10284014 -1
CDS:Y43C5A.6a 10284056 10284135 -1
CDS:Y43C5A.6a 10284220 10284244 -1

1 Sequence

Length
1188

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y43C5A.6a.1 Y43C5A.6a.1 1530   IV: 10281634-10284244