WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02F4.2c.2 Sequence Name  C02F4.2c.2
Length (nt)  2690   Chromosome Location  IV: 10492869-10501128
Chromosome . Primary Identifier  IV Chromosome Location . Start  10492869
Chromosome Location . End  10501128 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02F4.2c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006527 tax-6 C02F4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02F4.2c C02F4.2c 1629   IV: 10493862-10494052

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02F4.2c.2 10492869 10501128 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141526   1184   IV: 10492869-10494052 Caenorhabditis elegans
Exon141530   119   IV: 10494509-10494627 Caenorhabditis elegans
Exon141537   85   IV: 10495182-10495266 Caenorhabditis elegans
Exon141543   78   IV: 10497968-10498045 Caenorhabditis elegans
Exon141548   126   IV: 10498091-10498216 Caenorhabditis elegans
Exon141553   95   IV: 10498319-10498413 Caenorhabditis elegans
Exon141558   78   IV: 10498490-10498567 Caenorhabditis elegans
Exon141563   140   IV: 10498616-10498755 Caenorhabditis elegans
Exon141568   486   IV: 10499076-10499561 Caenorhabditis elegans
Exon141573   101   IV: 10499609-10499709 Caenorhabditis elegans
Exon141579   90   IV: 10500446-10500535 Caenorhabditis elegans
Exon141584   108   IV: 10501021-10501128 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02F4.2c.2 10492869 10501128 -1

1 Sequence

Length
2690

1 Sequence Ontology Term

Identifier Name Description
transcript