WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C02F4.2a Sequence Name  C02F4.2a
Length (nt)  1608   Chromosome Location  IV: 10493862-10494052
Chromosome . Primary Identifier  IV Chromosome Location . Start  10493862
Chromosome Location . End  10494052
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02F4.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07853 TAX-6, isoform a 60.6 535 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00039438
WBRNAi00066726
WBRNAi00028353
WBRNAi00115258
WBRNAi00008325
WBRNAi00093956
WBRNAi00093930
WBRNAi00093881
WBRNAi00023026
WBRNAi00023124
WBRNAi00023636
WBRNAi00066528

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C02F4.2a 10493862 10494052 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006527 tax-6 C02F4.2 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C02F4.2a 10493862 10494052 -1
CDS:C02F4.2a 10494831 10494928 -1
CDS:C02F4.2a 10495182 10495266 -1
CDS:C02F4.2a 10497968 10498045 -1
CDS:C02F4.2a 10498091 10498216 -1
CDS:C02F4.2a 10498319 10498413 -1
CDS:C02F4.2a 10498490 10498567 -1
CDS:C02F4.2a 10498616 10498755 -1
CDS:C02F4.2a 10499076 10499561 -1
CDS:C02F4.2a 10499609 10499709 -1
CDS:C02F4.2a 10500446 10500535 -1
CDS:C02F4.2a 10501021 10501060 -1

1 Sequence

Length
1608

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C02F4.2a.1 C02F4.2a.1 2852   IV: 10492869-10501599
Transcript:C02F4.2a.2 C02F4.2a.2 2668   IV: 10492869-10501127