WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F36H1.4b Sequence Name  F36H1.4b
Length (nt)  1311   Chromosome Location  IV: 11057814-11057868
Chromosome . Primary Identifier  IV Chromosome Location . Start  11057814
Chromosome Location . End  11057868
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H1.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18670 LIN-3, isoform b 48.7 436 Caenorhabditis elegans
 

Other

50 RNAi

WormBase ID
WBRNAi00107721
WBRNAi00107722
WBRNAi00067079
WBRNAi00067115
WBRNAi00067180
WBRNAi00067283
WBRNAi00067340
WBRNAi00067584
WBRNAi00067602
WBRNAi00067638
WBRNAi00062583
WBRNAi00030244
WBRNAi00072469
WBRNAi00072468
WBRNAi00078383
WBRNAi00085569
WBRNAi00072467
WBRNAi00068451
WBRNAi00068453
WBRNAi00068452
WBRNAi00068455
WBRNAi00068454
WBRNAi00064503
WBRNAi00064583
WBRNAi00064635
WBRNAi00074293
WBRNAi00074292
WBRNAi00074295
WBRNAi00074294
WBRNAi00074297

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F36H1.4b 11057814 11057868 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F36H1.4b 11057814 11057868 1
CDS:F36H1.4b 11059405 11059644 1
CDS:F36H1.4b 11059693 11059857 1
CDS:F36H1.4b 11060409 11060490 1
CDS:F36H1.4b 11060538 11060664 1
CDS:F36H1.4b 11061068 11061156 1
CDS:F36H1.4b 11061624 11061899 1
CDS:F36H1.4b 11061947 11062058 1
CDS:F36H1.4b 11062114 11062200 1
CDS:F36H1.4b 11063094 11063171 1

1 Sequence

Length
1311

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F36H1.4b.2 F36H1.4b.2 1944   IV: 11054308-11063650
Transcript:F36H1.4b.1 F36H1.4b.1 1790   IV: 11057670-11063557
Transcript:F36H1.4b.3 F36H1.4b.3 1338   IV: 11057787-11063171