WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08G5.5a.3 Sequence Name  F08G5.5a.3
Length (nt)  1876   Chromosome Location  IV: 12420727-12432636
Chromosome . Primary Identifier  IV Chromosome Location . Start  12420727
Chromosome Location . End  12432636 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08G5.5a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008583 ugt-65 F08G5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08G5.5a F08G5.5a 1530   IV: 12425229-12425368

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08G5.5a.3 12420727 12432636 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147337   65   IV: 12420727-12420791 Caenorhabditis elegans
Exon147338   144   IV: 12422653-12422796 Caenorhabditis elegans
Exon147341   152   IV: 12425217-12425368 Caenorhabditis elegans
Exon147350   233   IV: 12426891-12427123 Caenorhabditis elegans
Exon147354   135   IV: 12427364-12427498 Caenorhabditis elegans
Exon147362   61   IV: 12429884-12429944 Caenorhabditis elegans
Exon147366   91   IV: 12429990-12430080 Caenorhabditis elegans
Exon147371   369   IV: 12430941-12431309 Caenorhabditis elegans
Exon147374   303   IV: 12431604-12431906 Caenorhabditis elegans
Exon147379   323   IV: 12432314-12432636 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08G5.5a.3 12420727 12432636 1

1 Sequence

Length
1876

1 Sequence Ontology Term

Identifier Name Description
transcript