WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F08G5.5a Sequence Name  F08G5.5a
Length (nt)  1530   Chromosome Location  IV: 12425229-12425368
Chromosome . Primary Identifier  IV Chromosome Location . Start  12425229
Chromosome Location . End  12425368
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08G5.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43580 UGT-65, isoform a 57.4 509 Caenorhabditis elegans
 

Other

0 RNAi

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F08G5.5a 12425229 12425368 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008583 ugt-65 F08G5.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F08G5.5a 12425229 12425368 1
CDS:F08G5.5a 12426891 12427123 1
CDS:F08G5.5a 12427364 12427498 1
CDS:F08G5.5a 12429884 12429944 1
CDS:F08G5.5a 12429990 12430080 1
CDS:F08G5.5a 12430941 12431309 1
CDS:F08G5.5a 12431604 12431906 1
CDS:F08G5.5a 12432314 12432511 1

1 Sequence

Length
1530

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F08G5.5a.2 F08G5.5a.2 1776   IV: 12420683-12432636
Transcript:F08G5.5a.3 F08G5.5a.3 1876   IV: 12420727-12432636
Transcript:F08G5.5a.1 F08G5.5a.1 1570   IV: 12425217-12432539