WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y116A8C.16a Sequence Name  Y116A8C.16a
Length (nt)  3612   Chromosome Location  IV: 16995822-16995863
Chromosome . Primary Identifier  IV Chromosome Location . Start  16995822
Chromosome Location . End  16995863
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.16a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43461 ROM-4, isoform a 133.4 1203 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00001442
WBRNAi00055431
WBRNAi00055432

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.16a 16995822 16995863 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004403 rom-4 Y116A8C.16 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.16a 16995822 16995863 1
CDS:Y116A8C.16a 16995912 16995976 1
CDS:Y116A8C.16a 16996028 16996111 1
CDS:Y116A8C.16a 16996188 16996243 1
CDS:Y116A8C.16a 16996703 16996944 1
CDS:Y116A8C.16a 16998743 16998843 1
CDS:Y116A8C.16a 16999491 16999834 1
CDS:Y116A8C.16a 17002700 17003082 1
CDS:Y116A8C.16a 17004743 17005120 1
CDS:Y116A8C.16a 17008629 17009225 1
CDS:Y116A8C.16a 17010273 17011018 1
CDS:Y116A8C.16a 17012586 17012725 1
CDS:Y116A8C.16a 17012892 17013154 1
CDS:Y116A8C.16a 17014416 17014586 1

1 Sequence

Length
3612

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y116A8C.16a.1 Y116A8C.16a.1 3979   IV: 16995822-17014953