WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y108G3AL.2 Sequence Name  Y108G3AL.2
Length (nt)  984   Chromosome Location  V: 166993-167133
Chromosome . Primary Identifier  V Chromosome Location . Start  166993
Chromosome Location . End  167133
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y108G3AL.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26040 Y108G3AL.2 38.2 327 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00055288

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y108G3AL.2 166993 167133 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022434 Y108G3AL.2 Y108G3AL.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y108G3AL.2 166993 167133 1
CDS:Y108G3AL.2 167875 168033 1
CDS:Y108G3AL.2 168321 168517 1
CDS:Y108G3AL.2 169981 170394 1
CDS:Y108G3AL.2 171278 171350 1

1 Sequence

Length
984

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y108G3AL.2.2 Y108G3AL.2.2 1324   V: 166987-173193
Transcript:Y108G3AL.2.1 Y108G3AL.2.1 1141   V: 166987-176823
Transcript:Y108G3AL.2.4 Y108G3AL.2.4 1222   V: 166987-171582
Transcript:Y108G3AL.2.3 Y108G3AL.2.3 1233   V: 166987-173149