WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39D8C.1.1 Sequence Name  Y39D8C.1.1
Length (nt)  5543   Chromosome Location  V: 323777-330725
Chromosome . Primary Identifier  V Chromosome Location . Start  323777
Chromosome Location . End  330725 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39D8C.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000022 abt-4 Y39D8C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39D8C.1 Y39D8C.1 5409   V: 323910-324352

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39D8C.1.1 323777 330725 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169739   576   V: 323777-324352 Caenorhabditis elegans
Exon169740   286   V: 324397-324682 Caenorhabditis elegans
Exon169741   307   V: 324937-325243 Caenorhabditis elegans
Exon169742   407   V: 325302-325708 Caenorhabditis elegans
Exon169743   473   V: 325757-326229 Caenorhabditis elegans
Exon169745   97   V: 326285-326381 Caenorhabditis elegans
Exon169746   101   V: 326478-326578 Caenorhabditis elegans
Exon169747   188   V: 326624-326811 Caenorhabditis elegans
Exon169748   562   V: 326858-327419 Caenorhabditis elegans
Exon169749   165   V: 327464-327628 Caenorhabditis elegans
Exon169750   751   V: 327676-328426 Caenorhabditis elegans
Exon169751   939   V: 328475-329413 Caenorhabditis elegans
Exon169752   107   V: 329464-329570 Caenorhabditis elegans
Exon169753   243   V: 329720-329962 Caenorhabditis elegans
Exon169754   205   V: 330049-330253 Caenorhabditis elegans
Exon169755   136   V: 330590-330725 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39D8C.1.1 323777 330725 -1

1 Sequence

Length
5543

1 Sequence Ontology Term

Identifier Name Description
transcript