WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39D8C.1 Sequence Name  Y39D8C.1
Length (nt)  5409   Chromosome Location  V: 323910-324352
Chromosome . Primary Identifier  V Chromosome Location . Start  323910
Chromosome Location . End  324352
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39D8C.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20234 ABT-4 203.2 1802 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00056229
WBRNAi00056230
WBRNAi00014251
WBRNAi00020400
WBRNAi00117472

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39D8C.1 323910 324352 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000022 abt-4 Y39D8C.1 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39D8C.1 323910 324352 -1
CDS:Y39D8C.1 324397 324682 -1
CDS:Y39D8C.1 324937 325243 -1
CDS:Y39D8C.1 325302 325708 -1
CDS:Y39D8C.1 325757 326229 -1
CDS:Y39D8C.1 326285 326381 -1
CDS:Y39D8C.1 326478 326578 -1
CDS:Y39D8C.1 326624 326811 -1
CDS:Y39D8C.1 326858 327419 -1
CDS:Y39D8C.1 327464 327628 -1
CDS:Y39D8C.1 327676 328426 -1
CDS:Y39D8C.1 328475 329413 -1
CDS:Y39D8C.1 329464 329570 -1
CDS:Y39D8C.1 329720 329962 -1
CDS:Y39D8C.1 330049 330253 -1
CDS:Y39D8C.1 330590 330724 -1

1 Sequence

Length
5409

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39D8C.1.1 Y39D8C.1.1 5543   V: 323777-330725