WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28F12.2d.2 Sequence Name  T28F12.2d.2
Length (nt)  2265   Chromosome Location  V: 4497461-4511449
Chromosome . Primary Identifier  V Chromosome Location . Start  4497461
Chromosome Location . End  4511449 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F12.2d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006796 unc-62 T28F12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F12.2d T28F12.2d 336   V: 4509913-4510148

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2d.2 4497461 4511449 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179148   129   V: 4497461-4497589 Caenorhabditis elegans
Exon179164   182   V: 4501219-4501400 Caenorhabditis elegans
Exon179176   151   V: 4501719-4501869 Caenorhabditis elegans
Exon179190   108   V: 4501917-4502024 Caenorhabditis elegans
Exon179204   258   V: 4502583-4502840 Caenorhabditis elegans
Exon179213   274   V: 4503957-4504230 Caenorhabditis elegans
Exon179240   158   V: 4505359-4505516 Caenorhabditis elegans
Exon179249   77   V: 4505829-4505905 Caenorhabditis elegans
Exon179267   270   V: 4509879-4510148 Caenorhabditis elegans
Exon179294   658   V: 4510792-4511449 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2d.2 4497461 4511449 1

1 Sequence

Length
2265

1 Sequence Ontology Term

Identifier Name Description
transcript