WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28F12.2e.1 Sequence Name  T28F12.2e.1
Length (nt)  1572   Chromosome Location  V: 4499796-4510891
Chromosome . Primary Identifier  V Chromosome Location . Start  4499796
Chromosome Location . End  4510891 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F12.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006796 unc-62 T28F12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F12.2e T28F12.2e 1572   V: 4499796-4499807

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2e.1 4499796 4510891 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179157   12   V: 4499796-4499807 Caenorhabditis elegans
Exon179167   182   V: 4501219-4501400 Caenorhabditis elegans
Exon179180   151   V: 4501719-4501869 Caenorhabditis elegans
Exon179194   108   V: 4501917-4502024 Caenorhabditis elegans
Exon179209   258   V: 4502583-4502840 Caenorhabditis elegans
Exon179225   268   V: 4503963-4504230 Caenorhabditis elegans
Exon179234   146   V: 4504975-4505120 Caenorhabditis elegans
Exon179257   77   V: 4505829-4505905 Caenorhabditis elegans
Exon179275   270   V: 4509879-4510148 Caenorhabditis elegans
Exon179279   100   V: 4510792-4510891 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2e.1 4499796 4510891 1

1 Sequence

Length
1572

1 Sequence Ontology Term

Identifier Name Description
transcript