WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28F12.2d.5 Sequence Name  T28F12.2d.5
Length (nt)  2134   Chromosome Location  V: 4501212-4511446
Chromosome . Primary Identifier  V Chromosome Location . Start  4501212
Chromosome Location . End  4511446 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F12.2d.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006796 unc-62 T28F12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F12.2d T28F12.2d 336   V: 4509913-4510148

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2d.5 4501212 4511446 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179158   189   V: 4501212-4501400 Caenorhabditis elegans
Exon179179   151   V: 4501719-4501869 Caenorhabditis elegans
Exon179193   108   V: 4501917-4502024 Caenorhabditis elegans
Exon179207   258   V: 4502583-4502840 Caenorhabditis elegans
Exon179222   268   V: 4503963-4504230 Caenorhabditis elegans
Exon179242   158   V: 4505359-4505516 Caenorhabditis elegans
Exon179252   77   V: 4505829-4505905 Caenorhabditis elegans
Exon179270   270   V: 4509879-4510148 Caenorhabditis elegans
Exon179290   655   V: 4510792-4511446 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2d.5 4501212 4511446 1

1 Sequence

Length
2134

1 Sequence Ontology Term

Identifier Name Description
transcript