WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:F25B4.6 Sequence Name  F25B4.6
Length (nt)  1389   Chromosome Location  V: 5682863-5683002
Chromosome . Primary Identifier  V Chromosome Location . Start  5682863
Chromosome Location . End  5683002
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B4.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE09624 HMGS-1 51.4 462 Caenorhabditis elegans
 

Other

31 RNAi

WormBase ID
WBRNAi00095582
WBRNAi00008696
WBRNAi00025211
WBRNAi00107647
WBRNAi00066891
WBRNAi00085697
WBRNAi00094193
WBRNAi00102777
WBRNAi00107649
WBRNAi00031351
WBRNAi00065027
WBRNAi00090844
WBRNAi00105948
WBRNAi00106026
WBRNAi00113277
WBRNAi00071530
WBRNAi00045469
WBRNAi00087123
WBRNAi00087125
WBRNAi00087124
WBRNAi00113168
WBRNAi00087126
WBRNAi00096583
WBRNAi00096334
WBRNAi00113048
WBRNAi00096417
WBRNAi00113131
WBRNAi00107648
WBRNAi00102661
WBRNAi00096500

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F25B4.6 5682863 5683002 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017769 hmgs-1 F25B4.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F25B4.6 5682863 5683002 -1
CDS:F25B4.6 5683052 5683263 -1
CDS:F25B4.6 5683318 5683506 -1
CDS:F25B4.6 5683554 5683788 -1
CDS:F25B4.6 5683835 5684060 -1
CDS:F25B4.6 5684107 5684259 -1
CDS:F25B4.6 5684310 5684438 -1
CDS:F25B4.6 5684483 5684587 -1

1 Sequence

Length
1389

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25B4.6.1 F25B4.6.1 1533   V: 5682721-5684589