WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8b.1 Sequence Name  W06H8.8b.1
Length (nt)  44298   Chromosome Location  V: 6121593-6202626
Chromosome . Primary Identifier  V Chromosome Location . Start  6121593
Chromosome Location . End  6202626 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8b W06H8.8b 44205   V: 6121593-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8b.1 6121593 6202626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

57 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182747   44   V: 6121593-6121636 Caenorhabditis elegans
Exon182756   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182769   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182782   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182795   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182808   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182821   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182834   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182847   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182860   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182873   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182886   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182899   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182912   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182925   172   V: 6129229-6129400 Caenorhabditis elegans
Exon182938   45   V: 6129492-6129536 Caenorhabditis elegans
Exon182945   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon182958   135   V: 6130915-6131049 Caenorhabditis elegans
Exon182975   123   V: 6133050-6133172 Caenorhabditis elegans
Exon182988   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183086   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183099   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183112   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183125   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183138   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183151   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183164   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183189   45   V: 6161647-6161691 Caenorhabditis elegans
Exon183198   502   V: 6164440-6164941 Caenorhabditis elegans
Exon183207   353   V: 6165182-6165534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8b.1 6121593 6202626 -1

1 Sequence

Length
44298

1 Sequence Ontology Term

Identifier Name Description
transcript