WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41E6.4a.1 Sequence Name  F41E6.4a.1
Length (nt)  4024   Chromosome Location  V: 8607800-8615843
Chromosome . Primary Identifier  V Chromosome Location . Start  8607800
Chromosome Location . End  8615843 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41E6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018285 smk-1 F41E6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41E6.4a F41E6.4a 3258   V: 8607802-8607885

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41E6.4a.1 8607800 8615843 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190409   86   V: 8607800-8607885 Caenorhabditis elegans
Exon190411   426   V: 8608113-8608538 Caenorhabditis elegans
Exon190413   157   V: 8608586-8608742 Caenorhabditis elegans
Exon190415   56   V: 8608819-8608874 Caenorhabditis elegans
Exon190421   305   V: 8611382-8611686 Caenorhabditis elegans
Exon190425   574   V: 8612179-8612752 Caenorhabditis elegans
Exon190429   261   V: 8612799-8613059 Caenorhabditis elegans
Exon190432   909   V: 8613105-8614013 Caenorhabditis elegans
Exon190436   141   V: 8614063-8614203 Caenorhabditis elegans
Exon190443   1109   V: 8614735-8615843 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41E6.4a.1 8607800 8615843 1

1 Sequence

Length
4024

1 Sequence Ontology Term

Identifier Name Description
transcript