WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F41E6.4a Sequence Name  F41E6.4a
Length (nt)  3258   Chromosome Location  V: 8607802-8607885
Chromosome . Primary Identifier  V Chromosome Location . Start  8607802
Chromosome Location . End  8607885
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41E6.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41239 SMK-1, isoform a 123.0 1085 Caenorhabditis elegans
 

Other

47 RNAi

WormBase ID
WBRNAi00070266
WBRNAi00046993
WBRNAi00008777
WBRNAi00025464
WBRNAi00095333
WBRNAi00073550
WBRNAi00073552
WBRNAi00014747
WBRNAi00072490
WBRNAi00073549
WBRNAi00095315
WBRNAi00095349
WBRNAi00073548
WBRNAi00072489
WBRNAi00072488
WBRNAi00073547
WBRNAi00073551
WBRNAi00073553
WBRNAi00046994
WBRNAi00032093
WBRNAi00095313
WBRNAi00108686
WBRNAi00108697
WBRNAi00108611
WBRNAi00095357
WBRNAi00095336
WBRNAi00095316
WBRNAi00095318
WBRNAi00095331
WBRNAi00095330

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F41E6.4a 8607802 8607885 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018285 smk-1 F41E6.4 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F41E6.4a 8607802 8607885 1
CDS:F41E6.4a 8608113 8608538 1
CDS:F41E6.4a 8608586 8608742 1
CDS:F41E6.4a 8608819 8608874 1
CDS:F41E6.4a 8611382 8611686 1
CDS:F41E6.4a 8612179 8612752 1
CDS:F41E6.4a 8612799 8613059 1
CDS:F41E6.4a 8613105 8614013 1
CDS:F41E6.4a 8614063 8614203 1
CDS:F41E6.4a 8614735 8615079 1

1 Sequence

Length
3258

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F41E6.4a.1 F41E6.4a.1 4024   V: 8607800-8615843