WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06H2.3a.1 Sequence Name  C06H2.3a.1
Length (nt)  1799   Chromosome Location  V: 11127497-11130095
Chromosome . Primary Identifier  V Chromosome Location . Start  11127497
Chromosome Location . End  11130095 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06H2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007387 jmjd-5 C06H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06H2.3a C06H2.3a 1737   V: 11127497-11127647

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06H2.3a.1 11127497 11130095 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197844   151   V: 11127497-11127647 Caenorhabditis elegans
Exon197845   80   V: 11127695-11127774 Caenorhabditis elegans
Exon197847   131   V: 11127852-11127982 Caenorhabditis elegans
Exon197849   105   V: 11128030-11128134 Caenorhabditis elegans
Exon197851   91   V: 11128180-11128270 Caenorhabditis elegans
Exon197853   291   V: 11128391-11128681 Caenorhabditis elegans
Exon197854   441   V: 11128733-11129173 Caenorhabditis elegans
Exon197855   282   V: 11129218-11129499 Caenorhabditis elegans
Exon197856   227   V: 11129869-11130095 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06H2.3a.1 11127497 11130095 1

1 Sequence

Length
1799

1 Sequence Ontology Term

Identifier Name Description
transcript