WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C06H2.3a Sequence Name  C06H2.3a
Length (nt)  1737   Chromosome Location  V: 11127497-11127647
Chromosome . Primary Identifier  V Chromosome Location . Start  11127497
Chromosome Location . End  11127647
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06H2.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05235 JMJD-5, isoform a 67.2 578 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00039952
WBRNAi00010351
WBRNAi00028605
WBRNAi00064109
WBRNAi00091493
WBRNAi00117698

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C06H2.3a 11127497 11127647 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007387 jmjd-5 C06H2.3 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:C06H2.3a 11127497 11127647 1
CDS:C06H2.3a 11127695 11127774 1
CDS:C06H2.3a 11127852 11127982 1
CDS:C06H2.3a 11128030 11128134 1
CDS:C06H2.3a 11128180 11128270 1
CDS:C06H2.3a 11128391 11128681 1
CDS:C06H2.3a 11128733 11129173 1
CDS:C06H2.3a 11129218 11129499 1
CDS:C06H2.3a 11129869 11130033 1

1 Sequence

Length
1737

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C06H2.3a.1 C06H2.3a.1 1799   V: 11127497-11130095