WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W04D2.1b Sequence Name  W04D2.1b
Length (nt)  2685   Chromosome Location  V: 12478416-12478538
Chromosome . Primary Identifier  V Chromosome Location . Start  12478416
Chromosome Location . End  12478538
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04D2.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21256 ATN-1, isoform b 104.1 894 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00067215
WBRNAi00007427
WBRNAi00054765
WBRNAi00019589
WBRNAi00109544
WBRNAi00036270
WBRNAi00110192
WBRNAi00080494
WBRNAi00054766
WBRNAi00111870
WBRNAi00109155
WBRNAi00109253
WBRNAi00091678
WBRNAi00091693
WBRNAi00091708
WBRNAi00091723
WBRNAi00091738
WBRNAi00091753
WBRNAi00091774
WBRNAi00109447
WBRNAi00109350

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W04D2.1b 12478416 12478538 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000228 atn-1 W04D2.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:W04D2.1b 12478416 12478538 1
CDS:W04D2.1b 12479740 12480061 1
CDS:W04D2.1b 12480362 12480610 1
CDS:W04D2.1b 12481114 12481196 1
CDS:W04D2.1b 12481284 12481376 1
CDS:W04D2.1b 12481539 12482565 1
CDS:W04D2.1b 12482624 12483056 1
CDS:W04D2.1b 12483187 12483391 1
CDS:W04D2.1b 12483898 12484047 1

1 Sequence

Length
2685

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W04D2.1b.1 W04D2.1b.1 3092   V: 12478411-12484449