WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C53A5.3 Sequence Name  C53A5.3
Length (nt)  1386   Chromosome Location  V: 14525408-14525581
Chromosome . Primary Identifier  V Chromosome Location . Start  14525408
Chromosome Location . End  14525581
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53A5.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08952 HDA-1 52.1 461 Caenorhabditis elegans
 

Other

74 RNAi

WormBase ID
WBRNAi00078291
WBRNAi00106573
WBRNAi00113276
WBRNAi00067004
WBRNAi00067088
WBRNAi00067107
WBRNAi00067121
WBRNAi00067135
WBRNAi00067212
WBRNAi00067290
WBRNAi00110648
WBRNAi00030096
WBRNAi00110645
WBRNAi00062797
WBRNAi00024317
WBRNAi00099785
WBRNAi00100381
WBRNAi00063054
WBRNAi00094010
WBRNAi00082190
WBRNAi00082119
WBRNAi00082122
WBRNAi00063028
WBRNAi00092462
WBRNAi00069934
WBRNAi00092463
WBRNAi00082189
WBRNAi00082117
WBRNAi00115435
WBRNAi00100755

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C53A5.3 14525408 14525581 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001834 hda-1 C53A5.3 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:C53A5.3 14525408 14525581 1
CDS:C53A5.3 14525628 14525745 1
CDS:C53A5.3 14525791 14526657 1
CDS:C53A5.3 14526751 14526977 1

1 Sequence

Length
1386

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C53A5.3.1 C53A5.3.1 1839   V: 14525389-14527411