WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C48G7.3i Sequence Name  C48G7.3i
Length (nt)  4107   Chromosome Location  V: 14784641-14784794
Chromosome . Primary Identifier  V Chromosome Location . Start  14784641
Chromosome Location . End  14784794
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48G7.3i

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45050 RIN-1, isoform i 149.8 1368 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00042749
WBRNAi00042751
WBRNAi00012105
WBRNAi00020850
WBRNAi00029951
WBRNAi00029952

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C48G7.3i 14784641 14784794 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008183 rin-1 C48G7.3 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:C48G7.3i 14784641 14784794 -1
CDS:C48G7.3i 14785180 14785648 -1
CDS:C48G7.3i 14786002 14787123 -1
CDS:C48G7.3i 14787178 14787297 -1
CDS:C48G7.3i 14787600 14787768 -1
CDS:C48G7.3i 14789510 14789699 -1
CDS:C48G7.3i 14795926 14796474 -1
CDS:C48G7.3i 14797522 14797603 -1
CDS:C48G7.3i 14798223 14798396 -1
CDS:C48G7.3i 14798971 14799067 -1
CDS:C48G7.3i 14799235 14799406 -1
CDS:C48G7.3i 14800805 14800889 -1
CDS:C48G7.3i 14801778 14801897 -1
CDS:C48G7.3i 14802124 14802177 -1
CDS:C48G7.3i 14803301 14803481 -1
CDS:C48G7.3i 14803754 14803992 -1
CDS:C48G7.3i 14804680 14804809 -1

1 Sequence

Length
4107

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C48G7.3i.1 C48G7.3i.1 4107   V: 14784641-14804809