WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y80D3A.2c.1 Sequence Name  Y80D3A.2c.1
Length (nt)  315   Chromosome Location  V: 18860750-18861857
Chromosome . Primary Identifier  V Chromosome Location . Start  18860750
Chromosome Location . End  18861857 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y80D3A.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001258 emb-4 Y80D3A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y80D3A.2c Y80D3A.2c 315   V: 18860750-18860898

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y80D3A.2c.1 18860750 18861857 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216868   149   V: 18860750-18860898 Caenorhabditis elegans
Exon216870   166   V: 18861692-18861857 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y80D3A.2c.1 18860750 18861857 -1

1 Sequence

Length
315

1 Sequence Ontology Term

Identifier Name Description
transcript