WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M04C3.1d.4 Sequence Name  M04C3.1d.4
Length (nt)  3557   Chromosome Location  V: 19437944-19444933
Chromosome . Primary Identifier  V Chromosome Location . Start  19437944
Chromosome Location . End  19444933 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M04C3.1d.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010850 M04C3.1 M04C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M04C3.1d M04C3.1d 2883   V: 19438766-19439205

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M04C3.1d.4 19437944 19444933 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217712   240   V: 19437944-19438183 Caenorhabditis elegans
Exon217717   62   V: 19438230-19438291 Caenorhabditis elegans
Exon217725   183   V: 19438340-19438522 Caenorhabditis elegans
Exon217730   629   V: 19438577-19439205 Caenorhabditis elegans
Exon217744   528   V: 19440192-19440719 Caenorhabditis elegans
Exon217752   672   V: 19441660-19442331 Caenorhabditis elegans
Exon217760   685   V: 19442951-19443635 Caenorhabditis elegans
Exon217768   178   V: 19444169-19444346 Caenorhabditis elegans
Exon217776   131   V: 19444393-19444523 Caenorhabditis elegans
Exon217784   166   V: 19444567-19444732 Caenorhabditis elegans
Exon217786   83   V: 19444851-19444933 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M04C3.1d.4 19437944 19444933 -1

1 Sequence

Length
3557

1 Sequence Ontology Term

Identifier Name Description
transcript