WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M04C3.1d Sequence Name  M04C3.1d
Length (nt)  2883   Chromosome Location  V: 19438766-19439205
Chromosome . Primary Identifier  V Chromosome Location . Start  19438766
Chromosome Location . End  19439205
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M04C3.1d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48247 M04C3.1, isoform d 112.0 960 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00034419
WBRNAi00050892
WBRNAi00050894
WBRNAi00017174
WBRNAi00019975
WBRNAi00075567

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M04C3.1d 19438766 19439205 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010850 M04C3.1 M04C3.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:M04C3.1d 19438766 19439205 -1
CDS:M04C3.1d 19440192 19440719 -1
CDS:M04C3.1d 19441660 19442331 -1
CDS:M04C3.1d 19442951 19443635 -1
CDS:M04C3.1d 19444169 19444346 -1
CDS:M04C3.1d 19444393 19444523 -1
CDS:M04C3.1d 19444567 19444732 -1
CDS:M04C3.1d 19444851 19444933 -1

1 Sequence

Length
2883

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M04C3.1d.4 M04C3.1d.4 3557   V: 19437944-19444933
Transcript:M04C3.1d.2 M04C3.1d.2 3683   V: 19437944-19445557
Transcript:M04C3.1d.3 M04C3.1d.3 3630   V: 19437946-19445552
Transcript:M04C3.1d.1 M04C3.1d.1 3738   V: 19437952-19445566