WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M04C3.1d.2 Sequence Name  M04C3.1d.2
Length (nt)  3683   Chromosome Location  V: 19437944-19445557
Chromosome . Primary Identifier  V Chromosome Location . Start  19437944
Chromosome Location . End  19445557 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M04C3.1d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010850 M04C3.1 M04C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M04C3.1d M04C3.1d 2883   V: 19438766-19439205

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M04C3.1d.2 19437944 19445557 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217713   240   V: 19437944-19438183 Caenorhabditis elegans
Exon217722   293   V: 19438230-19438522 Caenorhabditis elegans
Exon217729   629   V: 19438577-19439205 Caenorhabditis elegans
Exon217742   528   V: 19440192-19440719 Caenorhabditis elegans
Exon217750   672   V: 19441660-19442331 Caenorhabditis elegans
Exon217758   685   V: 19442951-19443635 Caenorhabditis elegans
Exon217766   178   V: 19444169-19444346 Caenorhabditis elegans
Exon217774   131   V: 19444393-19444523 Caenorhabditis elegans
Exon217782   166   V: 19444567-19444732 Caenorhabditis elegans
Exon217790   92   V: 19444851-19444942 Caenorhabditis elegans
Exon217794   69   V: 19445489-19445557 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M04C3.1d.2 19437944 19445557 -1

1 Sequence

Length
3683

1 Sequence Ontology Term

Identifier Name Description
transcript