WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M04C3.1d.1 Sequence Name  M04C3.1d.1
Length (nt)  3738   Chromosome Location  V: 19437952-19445566
Chromosome . Primary Identifier  V Chromosome Location . Start  19437952
Chromosome Location . End  19445566 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M04C3.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010850 M04C3.1 M04C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M04C3.1d M04C3.1d 2883   V: 19438766-19439205

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M04C3.1d.1 19437952 19445566 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217715   232   V: 19437952-19438183 Caenorhabditis elegans
Exon217724   976   V: 19438230-19439205 Caenorhabditis elegans
Exon217741   528   V: 19440192-19440719 Caenorhabditis elegans
Exon217749   672   V: 19441660-19442331 Caenorhabditis elegans
Exon217757   685   V: 19442951-19443635 Caenorhabditis elegans
Exon217765   178   V: 19444169-19444346 Caenorhabditis elegans
Exon217773   131   V: 19444393-19444523 Caenorhabditis elegans
Exon217781   166   V: 19444567-19444732 Caenorhabditis elegans
Exon217789   92   V: 19444851-19444942 Caenorhabditis elegans
Exon217795   78   V: 19445489-19445566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M04C3.1d.1 19437952 19445566 -1

1 Sequence

Length
3738

1 Sequence Ontology Term

Identifier Name Description
transcript