WormMine: Gene WBGene00219782

• WormBase Gene ID: WBGene00219782
• Gene Name: B0250.19
• Sequence Name: B0250.19
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by several genes including etr-1; dlc-1; and ogt-1 based on RNA-seq studies.
• Biotype: SO:0001267
• Genetic Position: :±
• Length (nt): 125

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00219782

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:B0250.19	B0250.19	125	V: 20480009-20480133

Other

0 CDSs

15 RNAi Result

• WBRNAi00095469
• WBRNAi00094324
• WBRNAi00038802
• WBRNAi00024362
• WBRNAi00085543
• WBRNAi00008284
• WBRNAi00116387
• WBRNAi00094060
• WBRNAi00094245
• WBRNAi00064909
• WBRNAi00106039
• WBRNAi00076043
• WBRNAi00083271
• WBRNAi00094440
• WBRNAi00116369

15 Allele

• gk963271
• WBVar02124844
• gk964176
• gk962705
• gk963489
• gk963304
• WBVar02122714
• WBVar02124642
• gk963809
• WBVar02120878
• WBVar02120880
• WBVar02121338
• WBVar01544338
• gk397437
• gk267133

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: WBGene00219782
• Start: 20480009
• End: 20480133
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

7 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_upregulated_neuron
	Transcripts depleted in purified oocyte P bodies comparing to in whole oocytes.	DESeq2, FDR < 0.05, fold change > 2.	WBPaper00065975:P-body_vs_oocyte_depleted
	Transcripts depleted in purified oocyte P bodies comparing to in the whole animal.	DESeq2, FDR < 0.05, fold change > 2.	WBPaper00065975:P-body_vs_WholeAnimal_depleted
	Transcripts that showed significantly increased expression in ilc-17.1(syb5296) comparing to in N2 animals at L4 larva stage.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066594:ilc-17.1(syb5296)_upregulated
	Transcripts that interact with 3xFLAG-DLC-1 as identified by immunoprecipitation followed by RNA sequencing.	DESeq2, fold change > 2,, p-value < 0.01	WBPaper00055334:DLC-1_interacting
	Transcripts of noncoding genes that showed significantly increased expression in muscle.	DESeq2 (version 1.24.0). Transcripts with a false-discovery rate adjusted p-value less than 0.05 were considered significantly differentially expressed.	WBPaper00062325:muscle_enriched_noncoding-RNA
	Transcripts that showed significantly increased expression in VC1743[mett-10(ok2204)] comparing to in N2 when animals grow on peptone-rich (NA22) plates.	DESeq2, p-value < 0.05, fold change > 2.	WBPaper00061357:mett-10(ok2204)_upregulated_NA22

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00219782
• Start: 20480009
• End: 20480133
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 125

1 Sequence Ontology Term