WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y108F1.5.1 Sequence Name  Y108F1.5.1
Length (nt)  444   Chromosome Location  X: 272930-274012
Chromosome . Primary Identifier  X Chromosome Location . Start  272930
Chromosome Location . End  274012 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y108F1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022433 Y108F1.5 Y108F1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y108F1.5 Y108F1.5 444   X: 272930-273323

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y108F1.5.1 272930 274012 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221389   394   X: 272930-273323 Caenorhabditis elegans
Exon221390   50   X: 273963-274012 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y108F1.5.1 272930 274012 -1

1 Sequence

Length
444

1 Sequence Ontology Term

Identifier Name Description
transcript