WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R57.1c Sequence Name  R57.1c
Length (nt)  2256   Chromosome Location  X: 302767-302884
Chromosome . Primary Identifier  X Chromosome Location . Start  302767
Chromosome Location . End  302884
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R57.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE12844 GCP-2.1, isoform c 83.7 751 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00052044
WBRNAi00017915
WBRNAi00034973

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:R57.1c 302767 302884 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020082 gcp-2.1 R57.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:R57.1c 302767 302884 1
CDS:R57.1c 303656 303970 1
CDS:R57.1c 304186 304440 1
CDS:R57.1c 304522 304658 1
CDS:R57.1c 304976 305087 1
CDS:R57.1c 305134 305227 1
CDS:R57.1c 305669 305850 1
CDS:R57.1c 306177 306321 1
CDS:R57.1c 306659 307027 1
CDS:R57.1c 307615 307899 1
CDS:R57.1c 307944 308070 1
CDS:R57.1c 308115 308231 1

1 Sequence

Length
2256

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R57.1c.1 R57.1c.1 2309   X: 302741-308258