WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M02E1.1a.1 Sequence Name  M02E1.1a.1
Length (nt)  3586   Chromosome Location  X: 326111-334600
Chromosome . Primary Identifier  X Chromosome Location . Start  326111
Chromosome Location . End  334600 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M02E1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019733 M02E1.1 M02E1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M02E1.1a M02E1.1a 3201   X: 326115-326184

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M02E1.1a.1 326111 334600 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221450   74   X: 326111-326184 Caenorhabditis elegans
Exon221453   169   X: 326241-326409 Caenorhabditis elegans
Exon221456   124   X: 327209-327332 Caenorhabditis elegans
Exon221459   335   X: 327380-327714 Caenorhabditis elegans
Exon221462   233   X: 327765-327997 Caenorhabditis elegans
Exon221465   48   X: 328080-328127 Caenorhabditis elegans
Exon221468   179   X: 328178-328356 Caenorhabditis elegans
Exon221471   399   X: 328780-329178 Caenorhabditis elegans
Exon221474   64   X: 329220-329283 Caenorhabditis elegans
Exon221477   393   X: 329748-330140 Caenorhabditis elegans
Exon221480   602   X: 331896-332497 Caenorhabditis elegans
Exon221482   357   X: 332579-332935 Caenorhabditis elegans
Exon221484   60   X: 333411-333470 Caenorhabditis elegans
Exon221487   192   X: 333520-333711 Caenorhabditis elegans
Exon221491   357   X: 334244-334600 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M02E1.1a.1 326111 334600 1

1 Sequence

Length
3586

1 Sequence Ontology Term

Identifier Name Description
transcript