WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38G1.1.1 Sequence Name  F38G1.1.1
Length (nt)  2355   Chromosome Location  X: 481450-486504
Chromosome . Primary Identifier  X Chromosome Location . Start  481450
Chromosome Location . End  486504 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38G1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000484 che-2 F38G1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38G1.1 F38G1.1 2283   X: 481451-481614

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F38G1.1.1 481450 486504 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221820   165   X: 481450-481614 Caenorhabditis elegans
Exon221821   89   X: 482565-482653 Caenorhabditis elegans
Exon221822   111   X: 482749-482859 Caenorhabditis elegans
Exon221823   269   X: 482912-483180 Caenorhabditis elegans
Exon221824   138   X: 483228-483365 Caenorhabditis elegans
Exon221825   125   X: 483586-483710 Caenorhabditis elegans
Exon221826   177   X: 483758-483934 Caenorhabditis elegans
Exon221827   75   X: 483978-484052 Caenorhabditis elegans
Exon221828   226   X: 484532-484757 Caenorhabditis elegans
Exon221829   208   X: 484810-485017 Caenorhabditis elegans
Exon221830   248   X: 485061-485308 Caenorhabditis elegans
Exon221831   263   X: 485823-486085 Caenorhabditis elegans
Exon221832   124   X: 486131-486254 Caenorhabditis elegans
Exon221833   137   X: 486368-486504 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F38G1.1.1 481450 486504 1

1 Sequence

Length
2355

1 Sequence Ontology Term

Identifier Name Description
transcript