WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25E2.5f.1 Sequence Name  F25E2.5f.1
Length (nt)  3018   Chromosome Location  X: 817927-825474
Chromosome . Primary Identifier  X Chromosome Location . Start  817927
Chromosome Location . End  825474 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25E2.5f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000899 daf-3 F25E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25E2.5f F25E2.5f 2577   X: 818320-818425

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5f.1 817927 825474 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222722   499   X: 817927-818425 Caenorhabditis elegans
Exon222734   137   X: 819004-819140 Caenorhabditis elegans
Exon222743   307   X: 819189-819495 Caenorhabditis elegans
Exon222752   172   X: 819699-819870 Caenorhabditis elegans
Exon222761   53   X: 820203-820255 Caenorhabditis elegans
Exon222771   122   X: 820300-820421 Caenorhabditis elegans
Exon222779   131   X: 820601-820731 Caenorhabditis elegans
Exon222786   661   X: 822022-822682 Caenorhabditis elegans
Exon222796   126   X: 822853-822978 Caenorhabditis elegans
Exon222803   240   X: 823173-823412 Caenorhabditis elegans
Exon222811   152   X: 823459-823610 Caenorhabditis elegans
Exon222820   156   X: 823658-823813 Caenorhabditis elegans
Exon222828   189   X: 825074-825262 Caenorhabditis elegans
Exon222831   73   X: 825402-825474 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5f.1 817927 825474 -1

1 Sequence

Length
3018

1 Sequence Ontology Term

Identifier Name Description
transcript