WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25E2.5g.1 Sequence Name  F25E2.5g.1
Length (nt)  2352   Chromosome Location  X: 818320-823793
Chromosome . Primary Identifier  X Chromosome Location . Start  818320
Chromosome Location . End  823793 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25E2.5g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000899 daf-3 F25E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25E2.5g F25E2.5g 2352   X: 818320-818425

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5g.1 818320 823793 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222726   106   X: 818320-818425 Caenorhabditis elegans
Exon222735   137   X: 819004-819140 Caenorhabditis elegans
Exon222744   307   X: 819189-819495 Caenorhabditis elegans
Exon222753   172   X: 819699-819870 Caenorhabditis elegans
Exon222762   53   X: 820203-820255 Caenorhabditis elegans
Exon222772   122   X: 820300-820421 Caenorhabditis elegans
Exon222780   131   X: 820601-820731 Caenorhabditis elegans
Exon222787   661   X: 822022-822682 Caenorhabditis elegans
Exon222793   135   X: 822844-822978 Caenorhabditis elegans
Exon222804   240   X: 823173-823412 Caenorhabditis elegans
Exon222812   152   X: 823459-823610 Caenorhabditis elegans
Exon222814   136   X: 823658-823793 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5g.1 818320 823793 -1

1 Sequence

Length
2352

1 Sequence Ontology Term

Identifier Name Description
transcript