WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25E2.5d.1 Sequence Name  F25E2.5d.1
Length (nt)  2688   Chromosome Location  X: 818320-825426
Chromosome . Primary Identifier  X Chromosome Location . Start  818320
Chromosome Location . End  825426 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25E2.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000899 daf-3 F25E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25E2.5d F25E2.5d 2688   X: 818320-818425

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5d.1 818320 825426 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222728   106   X: 818320-818425 Caenorhabditis elegans
Exon222732   137   X: 819004-819140 Caenorhabditis elegans
Exon222741   307   X: 819189-819495 Caenorhabditis elegans
Exon222750   172   X: 819699-819870 Caenorhabditis elegans
Exon222759   53   X: 820203-820255 Caenorhabditis elegans
Exon222769   122   X: 820300-820421 Caenorhabditis elegans
Exon222777   131   X: 820601-820731 Caenorhabditis elegans
Exon222784   661   X: 822022-822682 Caenorhabditis elegans
Exon222791   135   X: 822844-822978 Caenorhabditis elegans
Exon222801   240   X: 823173-823412 Caenorhabditis elegans
Exon222809   152   X: 823459-823610 Caenorhabditis elegans
Exon222818   156   X: 823658-823813 Caenorhabditis elegans
Exon222823   102   X: 824068-824169 Caenorhabditis elegans
Exon222826   189   X: 825074-825262 Caenorhabditis elegans
Exon222829   25   X: 825402-825426 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5d.1 818320 825426 -1

1 Sequence

Length
2688

1 Sequence Ontology Term

Identifier Name Description
transcript