WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39H12.3.1 Sequence Name  F39H12.3.1
Length (nt)  798   Chromosome Location  X: 838144-841493
Chromosome . Primary Identifier  X Chromosome Location . Start  838144
Chromosome Location . End  841493 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39H12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018214 F39H12.3 F39H12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39H12.3 F39H12.3 633   X: 838306-838399

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F39H12.3.1 838144 841493 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222860   256   X: 838144-838399 Caenorhabditis elegans
Exon222861   162   X: 838709-838870 Caenorhabditis elegans
Exon222862   89   X: 838919-839007 Caenorhabditis elegans
Exon222863   78   X: 839063-839140 Caenorhabditis elegans
Exon222864   65   X: 840645-840709 Caenorhabditis elegans
Exon222865   148   X: 841346-841493 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F39H12.3.1 838144 841493 -1

1 Sequence

Length
798

1 Sequence Ontology Term

Identifier Name Description
transcript