WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZC13.3 Sequence Name  ZC13.3
Length (nt)  2286   Chromosome Location  X: 883210-883359
Chromosome . Primary Identifier  X Chromosome Location . Start  883210
Chromosome Location . End  883359
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC13.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52790 MAM-1 84.9 761 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00058727
WBRNAi00066827
WBRNAi00037948

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZC13.3 883210 883359 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022504 mam-1 ZC13.3 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZC13.3 883210 883359 -1
CDS:ZC13.3 883978 884111 -1
CDS:ZC13.3 884159 884416 -1
CDS:ZC13.3 884463 884536 -1
CDS:ZC13.3 884583 884648 -1
CDS:ZC13.3 885527 885840 -1
CDS:ZC13.3 885883 885992 -1
CDS:ZC13.3 886041 886232 -1
CDS:ZC13.3 886541 886901 -1
CDS:ZC13.3 886949 887074 -1
CDS:ZC13.3 887549 887793 -1
CDS:ZC13.3 888028 888128 -1
CDS:ZC13.3 888184 888281 -1
CDS:ZC13.3 888324 888380 -1

1 Sequence

Length
2286

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZC13.3.1 ZC13.3.1 2559   X: 882951-888394