WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C44C1.4 Sequence Name  C44C1.4
Length (nt)  1644   Chromosome Location  X: 970724-970775
Chromosome . Primary Identifier  X Chromosome Location . Start  970724
Chromosome Location . End  970775
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44C1.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04214 VPS-45 62.1 547 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00042443
WBRNAi00000454
WBRNAi00011925
WBRNAi00076214
WBRNAi00087627
WBRNAi00029795
WBRNAi00085701
WBRNAi00087612
WBRNAi00087617
WBRNAi00087643
WBRNAi00085159
WBRNAi00099112

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C44C1.4 970724 970775 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016643 vps-45 C44C1.4 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:C44C1.4 970724 970775 -1
CDS:C44C1.4 970965 971114 -1
CDS:C44C1.4 971161 971283 -1
CDS:C44C1.4 971635 971741 -1
CDS:C44C1.4 971791 971883 -1
CDS:C44C1.4 972405 972494 -1
CDS:C44C1.4 972542 973037 -1
CDS:C44C1.4 973608 973783 -1
CDS:C44C1.4 973958 974022 -1
CDS:C44C1.4 974070 974268 -1
CDS:C44C1.4 974660 974752 -1

1 Sequence

Length
1644

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C44C1.4.1 C44C1.4.1 1881   X: 970583-974848