WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T13G4.3 Sequence Name  T13G4.3
Length (nt)  3858   Chromosome Location  X: 1163233-1163313
Chromosome . Primary Identifier  X Chromosome Location . Start  1163233
Chromosome Location . End  1163313
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13G4.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37147 TMC-1 147.1 1285 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00053286
WBRNAi00017899
WBRNAi00018692

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T13G4.3 1163233 1163313 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020490 tmc-1 T13G4.3 Caenorhabditis elegans

27 Locations


Feature . Primary Identifier
Start End Strand
CDS:T13G4.3 1163233 1163313 1
CDS:T13G4.3 1164719 1164792 1
CDS:T13G4.3 1167925 1168092 1
CDS:T13G4.3 1168150 1168307 1
CDS:T13G4.3 1168355 1168461 1
CDS:T13G4.3 1169167 1169283 1
CDS:T13G4.3 1169382 1169527 1
CDS:T13G4.3 1169579 1169729 1
CDS:T13G4.3 1170019 1170083 1
CDS:T13G4.3 1170135 1170359 1
CDS:T13G4.3 1170413 1170554 1
CDS:T13G4.3 1170928 1171059 1
CDS:T13G4.3 1171109 1171276 1
CDS:T13G4.3 1171810 1172011 1
CDS:T13G4.3 1172370 1172781 1
CDS:T13G4.3 1172857 1172967 1
CDS:T13G4.3 1173015 1173140 1
CDS:T13G4.3 1173186 1173264 1
CDS:T13G4.3 1173359 1173505 1
CDS:T13G4.3 1173585 1173742 1
CDS:T13G4.3 1174365 1174453 1
CDS:T13G4.3 1174511 1174607 1
CDS:T13G4.3 1174886 1175053 1
CDS:T13G4.3 1175169 1175286 1
CDS:T13G4.3 1175792 1175935 1
CDS:T13G4.3 1175978 1176093 1
CDS:T13G4.3 1176589 1176745 1

1 Sequence

Length
3858

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T13G4.3.2 T13G4.3.2 4493   X: 1162207-1177174
Transcript:T13G4.3.1 T13G4.3.1 4359   X: 1163159-1177172