WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02E10.1a.1 Sequence Name  K02E10.1a.1
Length (nt)  1012   Chromosome Location  X: 2496420-2501005
Chromosome . Primary Identifier  X Chromosome Location . Start  2496420
Chromosome Location . End  2501005 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02E10.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019317 rabr-1 K02E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02E10.1a K02E10.1a 657   X: 2496420-2496443

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02E10.1a.1 2496420 2501005 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225875   24   X: 2496420-2496443 Caenorhabditis elegans
Exon225876   138   X: 2497178-2497315 Caenorhabditis elegans
Exon225878   225   X: 2497576-2497800 Caenorhabditis elegans
Exon225881   73   X: 2499298-2499370 Caenorhabditis elegans
Exon225883   98   X: 2500383-2500480 Caenorhabditis elegans
Exon225886   454   X: 2500552-2501005 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02E10.1a.1 2496420 2501005 1

1 Sequence

Length
1012

1 Sequence Ontology Term

Identifier Name Description
transcript