WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T03G6.2c Sequence Name  T03G6.2c
Length (nt)  1353   Chromosome Location  X: 2599429-2599489
Chromosome . Primary Identifier  X Chromosome Location . Start  2599429
Chromosome Location . End  2599489
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03G6.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53506 NHR-40, isoform c 51.8 450 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00000541
WBRNAi00052309
WBRNAi00078890
WBRNAi00035107
WBRNAi00078892
WBRNAi00078891

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T03G6.2c 2599429 2599489 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003630 nhr-40 T03G6.2 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:T03G6.2c 2599429 2599489 1
CDS:T03G6.2c 2600806 2600924 1
CDS:T03G6.2c 2601750 2601801 1
CDS:T03G6.2c 2601848 2601913 1
CDS:T03G6.2c 2602550 2602764 1
CDS:T03G6.2c 2602814 2602929 1
CDS:T03G6.2c 2603306 2603483 1
CDS:T03G6.2c 2604381 2604471 1
CDS:T03G6.2c 2604525 2604621 1
CDS:T03G6.2c 2604709 2604818 1
CDS:T03G6.2c 2604981 2605132 1
CDS:T03G6.2c 2606179 2606274 1

1 Sequence

Length
1353

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T03G6.2c.1 T03G6.2c.1 1832   X: 2599408-2606732