WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02C5.3h.1 Sequence Name  T02C5.3h.1
Length (nt)  309   Chromosome Location  X: 2698974-2700578
Chromosome . Primary Identifier  X Chromosome Location . Start  2698974
Chromosome Location . End  2700578 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02C5.3h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020160 igcm-3 T02C5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02C5.3h T02C5.3h 309   X: 2698974-2699030

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T02C5.3h.1 2698974 2700578 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226343   57   X: 2698974-2699030 Caenorhabditis elegans
Exon226352   79   X: 2699331-2699409 Caenorhabditis elegans
Exon226361   46   X: 2699462-2699507 Caenorhabditis elegans
Exon226363   127   X: 2700452-2700578 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T02C5.3h.1 2698974 2700578 -1

1 Sequence

Length
309

1 Sequence Ontology Term

Identifier Name Description
transcript