WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14A11.7.1 Sequence Name  C14A11.7.1
Length (nt)  1086   Chromosome Location  X: 2823501-2827752
Chromosome . Primary Identifier  X Chromosome Location . Start  2823501
Chromosome Location . End  2827752 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14A11.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006055 ssr-2 C14A11.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14A11.7 C14A11.7 1008   X: 2823579-2823672

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14A11.7.1 2823501 2827752 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226959   172   X: 2823501-2823672 Caenorhabditis elegans
Exon226960   86   X: 2823719-2823804 Caenorhabditis elegans
Exon226961   138   X: 2823878-2824015 Caenorhabditis elegans
Exon226962   129   X: 2824979-2825107 Caenorhabditis elegans
Exon226963   141   X: 2825176-2825316 Caenorhabditis elegans
Exon226964   99   X: 2825370-2825468 Caenorhabditis elegans
Exon226965   129   X: 2825602-2825730 Caenorhabditis elegans
Exon226966   165   X: 2826665-2826829 Caenorhabditis elegans
Exon226967   27   X: 2827726-2827752 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14A11.7.1 2823501 2827752 -1

1 Sequence

Length
1086

1 Sequence Ontology Term

Identifier Name Description
transcript