WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H10B.1a.1 Sequence Name  Y71H10B.1a.1
Length (nt)  2134   Chromosome Location  X: 2834224-2838653
Chromosome . Primary Identifier  X Chromosome Location . Start  2834224
Chromosome Location . End  2838653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H10B.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022201 ntfc-1 Y71H10B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H10B.1a Y71H10B.1a 1671   X: 2834614-2834739

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H10B.1a.1 2834224 2838653 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226969   516   X: 2834224-2834739 Caenorhabditis elegans
Exon226972   271   X: 2834960-2835230 Caenorhabditis elegans
Exon226976   95   X: 2836039-2836133 Caenorhabditis elegans
Exon226980   609   X: 2836189-2836797 Caenorhabditis elegans
Exon226984   100   X: 2836848-2836947 Caenorhabditis elegans
Exon226988   147   X: 2837000-2837146 Caenorhabditis elegans
Exon226992   94   X: 2837193-2837286 Caenorhabditis elegans
Exon226996   120   X: 2837744-2837863 Caenorhabditis elegans
Exon227001   74   X: 2837917-2837990 Caenorhabditis elegans
Exon227004   108   X: 2838546-2838653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H10B.1a.1 2834224 2838653 -1

1 Sequence

Length
2134

1 Sequence Ontology Term

Identifier Name Description
transcript