WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M02F4.8a.2 Sequence Name  M02F4.8a.2
Length (nt)  1239   Chromosome Location  X: 3025063-3026974
Chromosome . Primary Identifier  X Chromosome Location . Start  3025063
Chromosome Location . End  3026974 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M02F4.8a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000175 aqp-7 M02F4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M02F4.8a M02F4.8a 876   X: 3025536-3025709

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M02F4.8a.2 3025063 3026974 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227397   95   X: 3025063-3025157 Caenorhabditis elegans
Exon227399   174   X: 3025536-3025709 Caenorhabditis elegans
Exon227403   199   X: 3025859-3026057 Caenorhabditis elegans
Exon227406   119   X: 3026104-3026222 Caenorhabditis elegans
Exon227409   371   X: 3026272-3026642 Caenorhabditis elegans
Exon227413   281   X: 3026694-3026974 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M02F4.8a.2 3025063 3026974 1

1 Sequence

Length
1239

1 Sequence Ontology Term

Identifier Name Description
transcript